Insertion junction: CLIP2.071316_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071316
Chromosome:chromosome 3
Location:4534882
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre03.g176000 (1 of 781) IPR000104 - Antifreeze protein, type I 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTGGCAAGGAGGACTTGGGCGAAAACTCCCAATCGCCGAGCTCGAC
Internal bar code:TTGGTGGGCCCTTGGCGCCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:104
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCGCCAATTGTGTTTGTC
Suggested primer 2:CTCCTCGAAGACGTCCATCG