Insertion junction: CLIP2.071316_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071316
Chromosome:chromosome 9
Location:2740699
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391450 HCP1 (1 of 4) 1.7.99.1 - Hydroxylamine reductase / Hydroxylamine (acceptor) reductase; Hybrid-cluster protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATAATTTTCCATCAATACCATTCGAGACGCGTTCATGTACGGTCGTAT
Internal bar code:TGAGTGAATCGTGATTCAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1429
LEAP-Seq percent confirming:67.1642
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CTATCCAGGAGAAGCGGCTG
Suggested primer 2:GTCCAGGGTTTGATGACCGT