Insertion junction: CLIP2.071320_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071320
Chromosome:chromosome 12
Location:7866830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g553600 (1 of 68) 2.1.1.43 - Histone-lysine N-methyltransferase / Protein-lysine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAAAGTCACAAACGTCTGGAGACGACCCCAGAAGTCAGCTACGACGG
Internal bar code:CAAGGGAGCAAAGAGATCGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1667
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CGCCTTGGGAACACACTTTG
Suggested primer 2:GGCCTGTATCTAGTGCCGTC