Insertion junction: CLIP2.071321_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071321
Chromosome:chromosome 12
Location:6544125
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g538150 (1 of 1) K05019 - chloride channel, nucleotide-sensitive, 1A (CLNS1A) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTAGGTCTCGGTCCTCGTGGCGGTTGGACGAAGCGAAGCTTGCGTGA
Internal bar code:ATCCCTCTCGGTCAGGGGAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:681
LEAP-Seq percent confirming:78.125
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGTCTTGGAGGTCTCAT
Suggested primer 2:CTGCGTCATAACTGCTGTGC