Insertion junction: CLIP2.071322_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071322
Chromosome:chromosome 5
Location:1884281
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g235850 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCAATCAAGCAATGGAAATGATTGTAGTAGAGGGGAAGAAGGGTCATG
Internal bar code:ATGGCGCATCAAGTGTGTCTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1355
LEAP-Seq percent confirming:3.26087
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:89
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGCGTGTGTCATTGATTC
Suggested primer 2:AGAGAGCAGCGCTGATTGTT