Insertion junction: CLIP2.071326_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071326
Chromosome:chromosome 16
Location:7019179
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g673729 CPN11 Chaperonin 11, chloroplastic; (1 of 1) PTHR10772:SF13 - CHLOROPLAST CHAPERONIN 10 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTGCGTTTTGTCACTGCTTCGCCTTCCTTGGAAATCCTCATTCTCGC
Internal bar code:CCATTGGACCCGTTATCGCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3804
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:160
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:165

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCCAAACTAGGTGCTGT
Suggested primer 2:GCGCGAATTTCCAGCATGAT