Insertion junction: CLIP2.071338_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071338
Chromosome:chromosome 7
Location:3314550
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334700 ATG101 (1 of 1) PF07855 - Protein of unknown function (DUF1649) (DUF1649); Autophagy-related protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCGTTCCAGCTCTCAACACCCTGGCCCGTGCCAGCTTTCTCCCGTAC
Internal bar code:ATGGAAAGAAGACGGTCATATT

Confirmation - LEAP-Seq

LEAP-Seq distance:3930
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGTAAAGGTTGTGCGC
Suggested primer 2:TTCACGTCGTGTCCAGTCAG