Insertion junction: CLIP2.071343_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071343
Chromosome:chromosome 8
Location:456058
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g358900 (1 of 3) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGGCTGCTGTCGACACGGTGCATTCTGGTGCCGTGTTGCCCCACGG
Internal bar code:TCTTAACCCGATTCAGAGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:193
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCACACATACGCACGT
Suggested primer 2:CGGTACTTCTCGGCGTAGTC