Insertion junction: CLIP2.071348_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071348
Chromosome:chromosome 1
Location:1574273
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008500 (1 of 2) PF12796//PF13857 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_5) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGGGTCGTATCTTGTTTTCGGGGTGATGTCTAGCTCCAGACAAAAA
Internal bar code:TGATGAAGATGCTCGCTGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1391
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAACCGTCAATTGCAAGGCC
Suggested primer 2:TCTTAGCATCCGTCCCCTCA