Insertion junction: CLIP2.071349_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071349
Chromosome:chromosome 9
Location:6747590
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417200 (1 of 1) K15030 - translation initiation factor 3 subunit M (EIF3M) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTAGACATTCCTCCTTGGTGCTAATGTCTGGGGCGAGACTTTGTTGGC
Internal bar code:CCTTCGGGACAGTTACGGCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5196
LEAP-Seq percent confirming:76.6129
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:124

Suggested primers for confirmation by PCR

Suggested primer 1:ACTAGAGGGGCGAGTAAGCA
Suggested primer 2:TCCGCATATTCGTACCACCG