Insertion junction: CLIP2.071354_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071354
Chromosome:chromosome 10
Location:6609112
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465850 (1 of 1) K12572 - PAB-dependent poly(A)-specific ribonuclease subunit 3 (PAN3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCGAGCGACTGCAGCTGCCCGTCCAATCTTCGGATGACTACTACTTTG
Internal bar code:AAAGGTTTCATCTCATCCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2796
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:GAAAGAGGAAGGCACGGGAA