Insertion junction: CLIP2.071355_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071355
Chromosome:chromosome 5
Location:730466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g245450 UMM4,COQ5A (1 of 1) K06127 - 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase (COQ5); Ubiquinone/menaquinone biosynthesis methyltransferase 3'UTR
Cre05.g245500 FAP175,ANK24 (1 of 1) PTHR24133//PTHR24133:SF21 - FAMILY NOT NAMED // ANKYRIN REPEAT-CONTAINING PROTEIN; Ankyrin Repeat Flagellar Associated Protein 175 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGCTTGGTCCAGCGTGCATGTTGTTTTATTCAAACGGGCTGCTGGG
Internal bar code:GGATTTCGTGTTTGGTTTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:524
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GAACCCAGCAAAAACGACCC
Suggested primer 2:AACACACCCGGATGATGCAT