Insertion junction: CLIP2.071360_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071360
Chromosome:chromosome 16
Location:1455211
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652600 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTCTTCCAGCTTTGCGCCCGAAGTACTGGATCCAGGGCCACATTCTT
Internal bar code:AACAGCTACATGTAACCGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1738
LEAP-Seq percent confirming:30.4348
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GACTACGCCACGCAGATACA
Suggested primer 2:TTTGCCCAGTCTCGTTCTCC