Insertion junction: CLIP2.071362_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071362
Chromosome:chromosome 6
Location:2944129
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g273400 TMC2 putative tRNA (cytosine-5)-methyltransferase 3'UTR
Cre06.g273413 (1 of 1) K14835 - ribosomal RNA methyltransferase Nop2 [EC:2.1.1.-] (NOP2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGGTATGCGTTCTTTGGTGATGCTGAGAGGCGAGCTGTCGGTGGCTG
Internal bar code:AGATGTCACCATCTGCGGCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:152
LEAP-Seq percent confirming:28.125
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATCGCAGCACATAGTG
Suggested primer 2:GTGCGAGTGAGGAAGGTGAA