Insertion junction: CLIP2.071368_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071368
Chromosome:chromosome 16
Location:3727013
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682013 (1 of 2) PTHR30545:SF2 - SUGAR FERMENTATION STIMULATION PROTEIN A 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGTTTCAAGGTTTGGCAAACACGTAGCAATTTTCGTGGCCAACCAAC
Internal bar code:TTTATGATGGACTGCCCATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2158
LEAP-Seq percent confirming:74.0741
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGAACTTGGAAGGGGCTG
Suggested primer 2:AGCTGTGCACAGTACCAGTC