Insertion junction: CLIP2.071371_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071371
Chromosome:chromosome 9
Location:1874398
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397550 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCAACGTCATCTCTCGGACTTAGTCGGGGTCGGTTCGTACAGGCACGG
Internal bar code:GCGAAGGCATCCCTTGAGGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1464
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAGTGTACCGTGCGTGAG
Suggested primer 2:AGTGCAGGGACATGTACGTG