Insertion junction: CLIP2.071380_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071380
Chromosome:chromosome 17
Location:6755799
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g746547 (1 of 6) PF07716 - Basic region leucine zipper (bZIP_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCATTGAACCCTGCACTTTTACATTCCATGCTCTTTTACTCGCTTCGC
Internal bar code:TACGTGCTTGAGTAGGATTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1464
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGATGGGCATGGGAGAC
Suggested primer 2:ATGTGTCCAGGAATGCAGGG