Insertion junction: CLIP2.071385_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071385
Chromosome:chromosome 14
Location:3481434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630550 DEG1B,DEG13,DEG12 Deg protease; (1 of 3) PTHR22939//PTHR22939:SF81 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 1, CHLOROPLASTIC outside_mRNA
Cre14.g801657 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCTTCCGATGCCCCCAGCACGCGCTCCCCCCCAGTCACACCATTGGCC
Internal bar code:GATTGAATGATTGGAAGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1811
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:CGCACCTTTGTCCAAGTTGG
Suggested primer 2:AGGGAGGTTGCCTTAAACGG