Insertion junction: CLIP2.071392_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071392
Chromosome:chromosome 9
Location:1098012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401750 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCCTGGGAACGGGGAAGTGCTTTGTGTTGCGTATTGCGACAGAATACA
Internal bar code:TACAAGACTTGCAACAAAACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1204
LEAP-Seq percent confirming:84.3137
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CACCGCAACCACGAATTTGT
Suggested primer 2:CGTAATGAATGCTGTGGGCG