Insertion junction: CLIP2.071394_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071394
Chromosome:chromosome 3
Location:4544439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176100 (1 of 1) K18732 - SAP domain-containing ribonucleoprotein (SARNP, CIP29, THO1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCAGTGCAAACAAAGGGTATACATGATTGCCCTGCCCCATCTGTTTGC
Internal bar code:CTAATAACGCGGGGGTCCTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2513
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGTTGTCCTGTCACTAA
Suggested primer 2:ATGCGACTGGAAGGAACCTG