Insertion junction: CLIP2.071399_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071399
Chromosome:chromosome 17
Location:3223062
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721517 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGTGGGAGCCGCAATCAAAGTCTCCGGAAATCGGGCGATGGGCGCTG
Internal bar code:GTACTTGCCAAAATTATGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1354
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCACTGGTGGCAAAACAG
Suggested primer 2:ATGGCGGTGTGATGGTCATT