Insertion junction: CLIP2.071401_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071401
Chromosome:chromosome 17
Location:3166628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720950 SRD3 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; (1 of 1) 1.3.1.94 - Polyprenol reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACTGCCATGTAGAATACCGACTTCACCGCATTGACCAGCTTGGTTCAT
Internal bar code:CGTGGGGCACTGCCCGGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:739
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAAGCGGAGGTAGGTCAT
Suggested primer 2:CAGGTTGAGGGTCAGCTGAG