Insertion junction: CLIP2.071401_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071401
Chromosome:chromosome 17
Location:3166640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720950 SRD3 3-oxo-5-alpha-steroid 4-dehydrogenase family protein; (1 of 1) 1.3.1.94 - Polyprenol reductase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGCAGTGAGGAAAGCCATGTGGAGAGCGTGGAAGAGTGGCCCCATG
Internal bar code:CGTGGGGCACTGCCCGGTTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTGAGGGTCAGCTGAG
Suggested primer 2:AGGAAGCGGAGGTAGGTCAT