Insertion junction: CLIP2.071402_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071402
Chromosome:chromosome 12
Location:5265124
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g527850 TRA1 (1 of 1) PTHR10741//PTHR10741:SF5 - TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X // TRANSLIN-ASSOCIATED PROTEIN X; Translin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGCTGTCATGCGACGGATCGGTGGGGAGATGGTTTTAAATCTCTTCC
Internal bar code:CGAAATCGAAACGTAACGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2979
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCTGGTGTACGTCGTGT
Suggested primer 2:GTCAAAGTTGGCACAGGCTG