Insertion junction: CLIP2.071403_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071403
Chromosome:chromosome 3
Location:7279986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207250 GLN4 (1 of 2) PTHR20852:SF50 - GLUTAMINE SYNTHETASE CYTOSOLIC ISOZYME 1-1-RELATED; Glutamine synthetase 3'UTR
Cre03.g207351 (1 of 2) PF10998 - Protein of unknown function (DUF2838) (DUF2838) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGACGAAACTATGGAAGCGCTCCTTGCCTCAGCCCTTACGCGTCCTTCT
Internal bar code:AGTTGAGGACGAGACTCTCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:376
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCAGCTACTACTTCGAGG
Suggested primer 2:ATTCTATCACTGGCGCGGAG