Insertion junction: CLIP2.071405_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071405
Chromosome:chromosome 12
Location:9830260
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546877 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAATTTAGCTACAACAACGGCATTGCCAGGCGTTGCAGGGCAAGCAAG
Internal bar code:GTGGGAGTACTTGTGAAATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1828
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTTGGTATCAACAGGCC
Suggested primer 2:GTAGCAGATTTCGCGGCTTG