Insertion junction: CLIP2.071409_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071409
Chromosome:chromosome 3
Location:210820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACAACAGGGCTTGCGCAATGGCGAGGTACAGCAGCGGGGCCAGCGGGCA
Internal bar code:GTGGTGATGCACCAAATTAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3756
LEAP-Seq percent confirming:93.2432
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACTGCACTCCTGCTCTG
Suggested primer 2:TCAGCACGGGAGAAACAGTC