Insertion junction: CLIP2.071412_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071412
Chromosome:chromosome 12
Location:8960624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g545400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGAAGCGATATGTCCGACCGCGGCACCGAGCGACAGCAGATGCAGCAG
Internal bar code:ATTGTGGTAGAACCGCTGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGATGCGTTACGGGGAGG
Suggested primer 2:CAGAAACACAGTCCTCCCCC