Insertion junction: CLIP2.071415_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071415
Chromosome:chromosome 13
Location:1218228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGTGAGCGTCTACAGAGTCCTAGACCACAGCCGTAAACAACAGCAGAG
Internal bar code:TGGGGTCGGAAGGTTTGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTGCGTGCTCACTCAAA
Suggested primer 2:TTTCTGCCTGACCCTCGAAC