Insertion junction: CLIP2.071415_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071415
Chromosome:chromosome 13
Location:1218228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570200 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCAAGGCAAGAGCTCAAGCCAAGACAAGCTTGCTTGAGCTTTCGGAG
Internal bar code:TGGGGTCGGAAGGTTTGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCTGCCTGACCCTCGAAC
Suggested primer 2:GCTTTGCGTGCTCACTCAAA