Insertion junction: CLIP2.071422_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071422
Chromosome:chromosome 6
Location:909616
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g255950 (1 of 1) K14553 - U3 small nucleolar RNA-associated protein 18 (UTP18) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACAAATAACGGCCCGTCGGCTGTGAACGGATTCTGAGCTGTCTCCG
Internal bar code:GAGTTGTGCCATATAATTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1748
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCTGTTGCGGATTCTGC
Suggested primer 2:TCGTAAGAGCCCACCCCATA