Insertion junction: CLIP2.071430_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071430
Chromosome:chromosome 6
Location:7963986
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800746 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGCAATTCGGAATACATAGGAGCGCTCAGCGTTCTGGTTTGGGAGCGC
Internal bar code:ATTTATGTACATCCGTAGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:776
LEAP-Seq percent confirming:43.75
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGCACGTCAACATAGG
Suggested primer 2:GGCCTTGAACAGCATCAGGA