Insertion junction: CLIP2.071432_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071432
Chromosome:chromosome 11
Location:810712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467637 (1 of 1) IPR009057//IPR009060//IPR015940 - Homeodomain-like // UBA-like // Ubiquitin-associated domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCGGGCACTGCTTTATACGCCCTGATACTCCAGCGCGTCCTTGAAAGG
Internal bar code:AAAGCATTAAGTTTTAATTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1320
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCCTCAAGCTGCTGAAC
Suggested primer 2:GTGCTAGTAGCTCCGCAGAG