Insertion junction: CLIP2.071437_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071437
Chromosome:chromosome 11
Location:851622
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467645 (1 of 2) PTHR10540:SF8 - COP9 SIGNALOSOME COMPLEX SUBUNIT 6 5'UTR
Cre11.g801245 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGGTGAAGTTCTGGCAAGCATGATACTCCGATGTCCAAATGTTCGATG
Internal bar code:CCGGTCTTGGGTTTGAGGAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3930
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCGGCTTTGACCCTACA
Suggested primer 2:TTTCTGTTCCGTGCCATCGA