Insertion junction: CLIP2.071438_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071438
Chromosome:chromosome 12
Location:6341838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g537000 (1 of 1) PF02041 - Auxin binding protein (Auxin_BP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAATCGAAGCCGAAGCACATTGCGCGCAACCCGTGGTGCTTGTGGAGT
Internal bar code:CGTTTGTGTGACGTGATTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:805
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAATGACACAGCGGTCGT
Suggested primer 2:CCGCTATGAGGCTCACTACG