Insertion junction: CLIP2.071444_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071444
Chromosome:chromosome 16
Location:1393091
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652100 MAP2 (1 of 1) PTHR10804//PTHR10804:SF9 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // METHIONINE AMINOPEPTIDASE 2; Methionine aminopeptidase 3'UTR
Cre16.g652150 FBP4 (1 of 1) K01103 - 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGACGCACAGCCCAGAGGCTTCGACGCCGACATCAGGGATAGCGAGGAT
Internal bar code:TCCGGTATCCAACCCCGTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1153
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCACAAGGATGATGACA
Suggested primer 2:TAGGGCTTCTGGGGTAGACC