Insertion junction: CLIP2.071444_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071444
Chromosome:chromosome 16
Location:1393094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652100 MAP2 (1 of 1) PTHR10804//PTHR10804:SF9 - PROTEASE FAMILY M24 METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P // METHIONINE AMINOPEPTIDASE 2; Methionine aminopeptidase 3'UTR
Cre16.g652150 FBP4 (1 of 1) K01103 - 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATGTAGCCATCCCCCGGTCTCTGTGCGCGCCTGCCCGCCGCGCTGCA
Internal bar code:TAGGAGGTCGGGTCTCTGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2435
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:84
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGGCTTCTGGGGTAGACC
Suggested primer 2:GGCCCACAAGGATGATGACA