Insertion junction: CLIP2.071465_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.071465
Chromosome:chromosome 6
Location:3419196
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278095 (1 of 1) IPR016024//IPR027417 - Armadillo-type fold // P-loop containing nucleoside triphosphate hydrolase outside_mRNA
Cre06.g278096 SELU2,SELENOU,SELU1 Selenoprotein U2; (1 of 4) PF13911 - AhpC/TSA antioxidant enzyme (AhpC-TSA_2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGTGACACGATGCACTGCATGCACGGGCGCTGCCACCCTCATCACTGTA
Internal bar code:ATGCCGGGGGAATCCGTTCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCAACAAAACTCACAGCGCG
Suggested primer 2:TCCAAGGCGGATGAACTGAC