Insertion junction: CLIP2.071470_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.071470
Chromosome:chromosome 6
Location:6503711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTACACCATGACGCTGATCACTATTGACAAGCCGCTGGTGACCCTGA
Internal bar code:GCGTATGGAGTGAATTAGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1077
LEAP-Seq percent confirming:38.7097
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTGTTTGCTCGCGTTCC
Suggested primer 2:GGTGTCTGGTGCTTGATGGA