Insertion junction: CLIP2.071477_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071477
Chromosome:chromosome 6
Location:4917695
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280900 VTI2,GOS1 (1 of 1) K08495 - golgi SNAP receptor complex member 1 (GOSR1, GOS1); Intra-Golgi Qb-SNARE, Gos1/Gos28-family (Qb.II) 3'UTR
Cre06.g280950 PYK2 Pyruvate kinase 2; (1 of 6) 2.7.1.40 - Pyruvate kinase / Phosphoenolpyruvate kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGTGTCTGTCGACTGGTCGAGTGGCATACGGTGACAGTGCCATCCCA
Internal bar code:TTACGGTCTACTAATAAGTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:2722
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGACGGTGTGACGAAG
Suggested primer 2:GTTTGTTGGGGGTGACATGC