Insertion junction: CLIP2.071488_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.071488
Chromosome:chromosome 11
Location:1811818
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467600 (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAACTTAACGGTCCATACACACTAGCTGCAGGAGTGTGCTGACCAAACT
Internal bar code:ACGGCTGGTAACGTACCTGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:284
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTCCCGATCACTCACCT
Suggested primer 2:TGCGTGCCAAACTGACAATG