Insertion junction: CLIP2.071489_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.071489
Chromosome:chromosome 16
Location:7035139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674179 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATAAGTGTGGGACTTCATCATTTGTAGGCGTTATTGGGTCACCCCGG
Internal bar code:GGTCGGAGAGACCACGAGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:TGGGCGGGTTGCTTATTAGG