Insertion junction: CLIP2.071489_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071489
Chromosome:chromosome 16
Location:7035226
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674179 (1 of 30) PTHR24349//PTHR24349:SF79 - SERINE/THREONINE-PROTEIN KINASE // NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGTAATCAGTTGTTAAGTTTTGCACGTGTTCACCACCTGATCACCTGA
Internal bar code:GGTCGGAGAGACCACGAGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2265
LEAP-Seq percent confirming:98.5714
LEAP-Seq n confirming:69
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGCGGGTTGCTTATTAGG
Suggested primer 2:GGCTGTTGACAACTGTGCTG