Insertion junction: CLIP2.071492_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071492
Chromosome:chromosome 7
Location:101691
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g312800 (1 of 18) PF12906 - RING-variant domain (RINGv) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGCCCCGACGTCGGACCGCTGGCTGACGGAGTACCCGGGATGCAGCT
Internal bar code:TACCGCTGCTGCCTATTGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2483
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGCTCTGTTTGCGAGT
Suggested primer 2:AATCTCTGTGTCGCTGTGCA