Insertion junction: CLIP2.071496_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071496
Chromosome:chromosome 13
Location:1099372
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g569200 SRP54 (1 of 1) PTHR11564//PTHR11564:SF5 - GTPASE CONTAINING FAMILY OF SIGNAL RECOGNITION PARTICLE PROTEINS // SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN; 54kDa Subunit of the Signal Recognition Particle 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATTGCCGGTGCGTCGTAGTGCACACGCACCGTGCTTTGGCAGACGTGG
Internal bar code:AGTACGAGTTAGTTTGCGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1912
LEAP-Seq percent confirming:23.8095
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGCGATGTGCTTTCTTAG
Suggested primer 2:CGATCGACCTCTCTTCCTGC