Insertion junction: CLIP2.071498_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071498
Chromosome:chromosome 2
Location:934706
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g079300 VPS4 AAA-ATPase of VPS4/SKD1 family; (1 of 1) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAATGAACGTCGTTGCCACCATGCGTGCATGGGGTGCACCATGTCAA
Internal bar code:ACGTATCGAGCTCCGGTGTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3827
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCTGTAACCCTCGCAG
Suggested primer 2:AGCTTACCTTGGCCATGACC