Insertion junction: CLIP2.071500_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.071500
Chromosome:chromosome 6
Location:6760481
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g295826 (1 of 1) IPR002048//IPR007065 - EF-hand domain // HPP 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCAAAATTCAGGAATTCTACCGGTCCACGCACACTTTGCATGCCATA
Internal bar code:ATGAAGCCATATGCGCACATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1246
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGTGAGAGGACTGTGAA
Suggested primer 2:CACTACTCACTTGGCTGCCA