Insertion junction: CLIP2.071502_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.071502
Chromosome:chromosome 2
Location:3729635
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g100633 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAATGCCGGCAATAGGAAAGCGACAGCGGTGATTCCCGTCGCGACGAC
Internal bar code:AAGCAAATTGCGAAAGAGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1788
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGACGGATCGTTGCTTTGAC
Suggested primer 2:GGCCATCACCTACAGATCGG