Insertion junction: CLIP2.071506_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.071506
Chromosome:chromosome 9
Location:5871028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411800 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTCACCAACCTGCCTTGACACTGTCCCATCGCACAGCCTTTGTTTGCA
Internal bar code:CTTACAAATGTGGAGCTCTCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1375
LEAP-Seq percent confirming:42.5
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCCCAACTTCATGTTCA
Suggested primer 2:CGCTCCTAAGTGTCGGAGTC