Insertion junction: CLIP2.071510_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.071510
Chromosome:chromosome 12
Location:301327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485500 (1 of 1) PTHR11757:SF12 - PROLYL ENDOPEPTIDASE-LIKE CDS
Cre12.g485550 (1 of 1) 4.1.3.4 - Hydroxymethylglutaryl-CoA lyase / HMG-CoA lyase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACAAGCTTTGTCTGGCATTTCCACATGCTCTCATGCAAGTACTTCTT
Internal bar code:ATGGACTCCTAATATGTTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1894
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GATTTTACCGCAGCGTGTCC
Suggested primer 2:CGCGTAGGGTGCATAAAACG